dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000621_78|CGC1
Gene ID: MGYG000000621_02285
Location and strand information: 246 - 1730 (-)
Family: 9.A.11.1.1
Protein type: TC
Protein description: Spore germination protein B1

Gene clsuter ID: MGYG000000621_78|CGC1
Gene ID: MGYG000000621_02286
Location and strand information: 1990 - 2577 (-)
Family: null
Protein type: null
Protein description: manganese efflux pump MntP

Gene clsuter ID: MGYG000000621_78|CGC1
Gene ID: MGYG000000621_02287
Location and strand information: 2662 - 3819 (+)
Family: 2.A.45.2.6
Protein type: TC
Protein description: Inner membrane protein YbiR

Gene clsuter ID: MGYG000000621_78|CGC1
Gene ID: MGYG000000621_02288
Location and strand information: 3842 - 4402 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000621_78|CGC1
Gene ID: MGYG000000621_02289
Location and strand information: 4423 - 5613 (-)
Family: GH5_2|CBM2|GH5
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.1583
Protein molecular weight: 43782.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000621_78|CGC1
Gene ID: MGYG000000621_02290
Location and strand information: 5845 - 7332 (+)
Family: null
Protein type: null
Protein description: Ribosomal RNA small subunit methyltransferase F

Gene clsuter ID: MGYG000000621_78|CGC1
Gene ID: MGYG000000621_02291
Location and strand information: 7416 - 8204 (+)
Family: null
Protein type: null
Protein description: putative RNA pseudouridine synthase

Gene clsuter ID: MGYG000000621_78|CGC1
Gene ID: MGYG000000621_02292
Location and strand information: 8224 - 9351 (+)
Family: 2.A.86.1.9
Protein type: TC
Protein description: Sodium-lithium/proton antiporter

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000621_02285	Spore germination protein B1	TC	246	1730	-	9.A.11.1.1
MGYG000000621_02286	manganese efflux pump MntP	null	1990	2577	-	Mntp
MGYG000000621_02287	Inner membrane protein YbiR	TC	2662	3819	+	2.A.45.2.6
MGYG000000621_02288	hypothetical protein	null	3842	4402	+	DUF436
MGYG000000621_02289	hypothetical protein	CAZyme	4423	5613	-	GH5_2\| CBM2\| GH5
MGYG000000621_02290	Ribosomal RNA small subunit methyltransferase F	null	5845	7332	+	Methyltr_RsmF_N\| Methyltr_RsmF_N\| Methyltr_RsmB-F\| RsmF_methylt_CI\| Methyltranf_PUA
MGYG000000621_02291	putative RNA pseudouridine synthase	null	7416	8204	+	PseudoU_synth_2
MGYG000000621_02292	Sodium-lithium/proton antiporter	TC	8224	9351	+	2.A.86.1.9
Protein ID	Protein Name	Type	Start	End	Strand	Signature